Cell Division Protein Kinase 2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cell Division Protein Kinase 2
  Conformer 1
(PDB)
1pxn (A)
  Conformer 2
(PDB)
1aq1  
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 209 0.73   13 - 16   34 - 34   60 - 63   81 - 145   147 - 294
2 62 0.69   3 - 12   17 - 33   35 - 59   64 - 80   146 - 146

Sequence


           ________9______________________33____________________59__63_______________80____________________________________________ 
 1pxn(A) : MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRtEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 
         :                                                                                                                          
 1aq1    : MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI----vPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 
           ________9______________________33____________________59__63_______________80____________________________________________ 

           ________________143_____________________________________________________________________________________________________ 
 1pxn(A) : HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 
         :                                                                                                                          
 1aq1    : HRDLKPQNLLINTEGAIKLADFGL-------------eVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 
           ________________143_____________________________________________________________________________________________________ 

           ______________________________________________________                                                                   
 1pxn(A) : RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL                                                                   
         :                                                                                                                          
 1aq1    : RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL                                                                   
           ______________________________________________________                                                                   

Morph

Morph animation in progress.
Status: Initialising

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
7.8
Translation
(A)
0.1
Closure
(%)
92.9
Bending Residues
( green )
  9 - 17
  33 - 35
  59 - 60
  63 - 64
  80 - 81
  143 - 162
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

Download and extract PyMOL PML script file Download