DynDom - Protein Domain Motions

B-Cell Lymphoma 6 Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

Property	Value
Name	B-Cell Lymphoma 6 Protein
Conformer 1 (PDB)	7q7s (A)
Conformer 2 (PDB)	7c7s (A)
Window Length	9
Minimum ratio	1.0
Minimum domain size	20

Domains

Domain	Size	Backbone RMSD (A)	Residues
1	44	7.56	50 - 93
2	41	8.64	9 - 49

Sequence

`________________________________________________________________________________________________________________________` `7q7s(A) : **********************************************************************************************************************` `:` `7c7s(A) : HSERRAVYIGALFPMSGGWPGGQACQPAVEMALEDVNSRRDILPDYELKLIHHDSKCDPGQATKYLYELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTF` `________________________________________________________________________________________________________________________` `________________________________________________________________________________________________________________________` `7q7s(A) : ********************************************************************************************************************` `:` `7c7s(A) : FRTHPSATLHNPTRVKLFEKWGWKKIATIQQTTEVFTSTLDDLEERVKEAGIEITFRQSFFSDPAVPVKNLKRQDARIIVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKI` `________________________________________________________________________________________________________________________` `________________________________________________________________________________________________________________________` `7q7s(A) : ********************************************************************************************************************` `:` `7c7s(A) : YDPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRLKRHPEETGGFQEAPLAYDAIWALALALNKTSgVRLEDFNYNNQTITDQIYRAMNSSSFEGVSGHVVFDA` `________________________________________________________________________________________________________________________` `________________________________________________________________________________________________________________________` `7q7s(A) : ********************************************************************************************************************` `:` `7c7s(A) : SGSRMAWTLIEQLQGGSYKKIGYYDSTKDDLSWSKTDKWIGGSPPADQTLVIKTFRFLSQKLFISVSVLSSLGIVLAVVCLSFNIYNSHVRYIQNSQPNLNNLTAVGCSLALAAVFPLGL` `________________________________________________________________________________________________________________________` `________________________________________________________________________________________________________________________` `7q7s(A) : ****************************************************************************************************ADSCIQFTRHASDVLL` `:` `7c7s(A) : DGYHIGRNQFPFVCQARLWLLGLGFSLGYGSMFTKIWWVHTVFTKlEPWKLYATVGLLVGMDVLTLAIWQIVDPLHRTIETFAKEEPKEDIDVSILPQLEHCSSRKMNTWLGIFYGYKGL` `________________________________________________________________________________________________________________________` `___________________________49________________________________________________________________________________` `7q7s(A) : NLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE` `:` `7c7s(A) : LLLLGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQDAAFAFASLAIVFSSYITLVVLFVPKMRRLITRG**********************` `__________________________808________________________________________________________________________________`

Morph

Morph animation in progress.
Status: Initialising

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property	Value
Fixed Domain ( blue )	1
Moving Domain ( red )	2
Rotation Angle (deg)	160.8
Translation (A)	-5.1
Closure (%)	21.1
Bending Residues ( green )	49 - 50
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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