Imine Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Imine Reductase
  Conformer 1
(PDB) 		4d3f (A)
  Conformer 2
(PDB) 		4d3d (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 152 0.73   25 - 113   120 - 182
2 127 0.24   114 - 119   183 - 303

Sequence


           __________________________________________________________________________________________113___________________________ 
 4d3f(A) : **KSVTVIGLGPMGQAMADVFLEYGYSVTVWNRTSSKADQLVAKGAIRVSTVNEALAANELVILSLTDYNVMYSILEPVSENLFGKVLVNLSSDTPEKARKAAKWLEDRGARHITGGVQV 
         :                                                                                                                          
 4d3d(A) : NRKSVTVIGLGPMGQAMADVFLEYGYSVTVWNRTSSKADQLVAKGAIRVSTVNEALAANELVILSLTDYNVMYSILEPVSENLFGKVLVNLSSDTPEKARKAAKWLEDRGARHITGGVQV 
           __________________________________________________________________________________________113___________________________ 

           _______________________________________182______________________________________________________________________________ 
 4d3f(A) : PPSGIGKSESYTYYSGDRVVFEAHRETLEVLTSSDYRGEDPGLAMLYYQIQMDIFWTAMLSYLHALAIANANGITAEQFLPYASAMMSSLPKFVEFYTPRLDEGEHPGDVDRLAMGLASV 
         :                                                                                                                          
 4d3d(A) : PPSGIGKSESYTYYSGDRVVFEAHRETLEVLTSSDYRGEDPGLAMLYYQIQMDIFWTAMLSYLHALAIANANGITAEQFLPYASAMMSSLPKFVEFYTPRLDEGEHPGDVDRLAMGLASV 
           _______________________________________182______________________________________________________________________________ 

           ______________________________________________                                                                           
 4d3f(A) : EHVVHTTQEAGIDIALPATVLEVFRRGMKTGHASDSFTSLIEIFKN                                                                           
         :                                                                                                                          
 4d3d(A) : EHVVHTTQEAGIDIALPATVLEVFRRGMKTGHASDSFTSLIEIFK*                                                                           
           ______________________________________________                                                                           

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		9.8
Translation
(A) 		0.3
Closure
(%) 		86.6
Bending Residues
( green ) 		  113 - 120
  182 - 185
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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