Imine Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Imine Reductase
  Conformer 1
(PDB) 		4d3s (A)
  Conformer 2
(PDB) 		4d3f (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 161 0.99   11 - 171
2 118 1.29   172 - 289

Sequence


           ________________________________________________________________________________________________________________________ 
 4d3s(A) : KKSPVTLIGLGPMGQAMAGALLEAGYELTVWNRTKAKAEALAERGAAVADSPAEALRAGGPVLLSLTEHAVMYRVLEGAESDLKGRTILNLGSDTPAASRAAAAWAEGHGARYVTGGVMS 
         :                                                                                                                          
 4d3f(A) : **KSVTVIGLGPMGQAMADVFLEYGYSVTVWNRTSSKADQLVAKGAIRVSTVNEALAANELVILSLTDYNVMYSILEPVSENLFGKVLVNLSSDTPEKARKAAKWLEDRGARHITGGVQV 
           ________________________________________________________________________________________________________________________ 

           __________________________________________171___________________________________________________________________________ 
 4d3s(A) : PAPGIGSSSVFSFYSGDRAAFEENKALLEVLTATDFRGEDPGLAQVYYQILLDLFWTTMTGYLHALAVARAEGVPVGTITPYL-IEGNDMAMFFEGTSAAVAEGRFPGDEDRISMDAASM 
         :                                                                                                                          
 4d3f(A) : PPSGIGKSESYTYYSGDRVVFEAHRETLEVLTSSDYRGEDPGLAMLYYQIQMDIFWTAMLSYLHALAIANANGITAEQFLPYASAMMSSLPKFVEFYTPRLDEGEHPGDVDRLAMGLASV 
           __________________________________________185___________________________________________________________________________ 

           ______________________________________________                                                                           
 4d3s(A) : EHVVQTSRDAGVDTALPEAVLSLFRRGLDAGFAESSFARLVTLMDA                                                                           
         :                                                                                                                          
 4d3f(A) : EHVVHTTQEAGIDIALPATVLEVFRRGMKTGHASDSFTSLIEIFKN                                                                           
           ______________________________________________                                                                           

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		14.8
Translation
(A) 		-0.9
Closure
(%) 		87.6
Bending Residues
( green ) 		  171 - 172
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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