Sensory Transduction Regulatory Protein, Anti-Anti-Sigma Factor Phyr

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Sensory Transduction Regulatory Protein, Anti-Anti-Sigma Factor Phyr
  Conformer 1
(PDB) 		4qic (A)
  Conformer 2
(PDB) 		5uxw (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 115 3.11   4 - 137
2 89 4.01   138 - 226

Sequence


           _______________________________________________________________________________________________________________________1 
 4qic(A) : SLSTRIAPHLPYLRRFARSVTGSQSSGDAYVSAMLEALVADISIFPRASCDRIGTYWLFCHLFDQeQKTSAKLSYLTPRARQAFLLIAVEGFNEQEASEIMNLDARDFRKLLNQASIDIS 
         :                                                                                                                          
 5uxw(A) : SLSTRIAPHLPYLRRFARSVTGSQSSGDAYVSAMLEALIADISIFPRASSDRIGTYWLFCHLFDQ-----aKLSYLTPRARQAFLLIAVEGFNEQEASEIMNLDARDFRKLLNQASIDIS 
           _______________________________________________________________________________________________________________________1 

           37______________________________________________________________________________________________________________________ 
 4qic(A) : QQIATQVMIIEDEPLIAMDIEQMVESLGHQVVGIARTRKEAVVMYHQKKPRLILADIQLADNSSGIDAVNDILQNDRIPVIFITAFPERLLTGERPEPTFLVTKPFNPDMVKALISQALF 
         :                                                                                                                          
 5uxw(A) : QQIATQVMIIEDEPLIAMDIEQMVESLGHQVVGIARTRKEAVVMYHQKKPRLILADIQLADNSSGIDAVNDILQNDRIPVIFITAFPERLLTGERPEPTFLVTKPFNPDMVKALISQALF 
           37______________________________________________________________________________________________________________________ 

           ___________                                                                                                              
 4qic(A) : FKE********                                                                                                              
         :                                                                                                                          
 5uxw(A) : FKENASKAALE                                                                                                              
           ___________                                                                                                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		85.2
Translation
(A) 		-1.8
Closure
(%) 		89.9
Bending Residues
( green ) 		  137 - 138
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download