(S)-Imine Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name (S)-Imine Reductase
  Conformer 1
(PDB) 		4oqy (A)
  Conformer 2
(PDB) 		4d3d (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 164 0.87   6 - 169
2 99 1.14   170 - 284

Sequence


           ________________________________________________________________________________________________________________________ 
 4oqy(A) : *KQSVTVIGLGPMGQAMVNTFLDNGHEVTVWNRTASKAEALVARGAVLAPTVEDALSANELIVLSLTDYDAVYAILEPVTGSLSGKVIANLSSDTPDKAREAAKWAAKHGAKHLTGGVQV 
         :                                                                                                                          
 4d3d(A) : NRKSVTVIGLGPMGQAMADVFLEYGYSVTVWNRTSSKADQLVAKGAIRVSTVNEALAANELVILSLTDYNVMYSILEPVSENLFGKVLVNLSSDTPEKARKAAKWLEDRGARHITGGVQV 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________169________________________________________________________________________ 
 4oqy(A) : PPPLIGKPESSTYYSGPKDVFDAHEDTLKVLTNADYRGEDAGLAAMYYQAQMTIFWTTMLSYYQTLALGQANGVSAKELLPYATMMTSMMPHFL----------------dRLAMGAASV 
         :                                                                                                                          
 4d3d(A) : PPSGIGKSESYTYYSGDRVVFEAHRETLEVLTSSDYRGEDPGLAMLYYQIQMDIFWTAMLSYLHALAIANANGITAEQFLPYASAMMSSLPKFVEFYTPRLDEGEHPGDVDRLAMGLASV 
           _____________________________________________188________________________________________________________________________ 

           _____________________________________________                                                                            
 4oqy(A) : DHVLHTHQDAGVSTVLPAAVAEIFKAGMEKGFAENSFSSLIEVLK                                                                            
         :                                                                                                                          
 4d3d(A) : EHVVHTTQEAGIDIALPATVLEVFRRGMKTGHASDSFTSLIEIFK                                                                            
           _____________________________________________                                                                            

Morph
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		14.6
Translation
(A) 		-0.2
Closure
(%) 		18.2
Bending Residues
( green ) 		  169 - 170
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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