Threonyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Threonyl-Trna Synthetase
  Conformer 1
(PDB) 		1evk (A)
  Conformer 2
(PDB) 		1evk (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 349 0.5   244 - 418   467 - 640
2 48 0.38   419 - 466

Sequence


           ________________________________________________________________________________________________________________________ 
 1evk(A) : RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSC 
         :                                                                                                                          
 1evk(B) : RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSC 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________418_____________________________________________466_______________ 
 1evk(A) : HRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCG 
         :                                                                                                                          
 1evk(B) : HRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCG 
           ______________________________________________________418_____________________________________________466_______________ 

           ________________________________________________________________________________________________________________________ 
 1evk(A) : TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEV 
         :                                                                                                                          
 1evk(B) : TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEV 
           ________________________________________________________________________________________________________________________ 

           _________________________________________                                                                                
 1evk(A) : ESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE                                                                                
         :                                                                                                                          
 1evk(B) : ESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE                                                                                
           _________________________________________                                                                                

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		16.0
Translation
(A) 		-0.2
Closure
(%) 		99.5
Bending Residues
( green ) 		  418 - 419
  466 - 469
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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