Atp Phosphoribosyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Atp Phosphoribosyltransferase
  Conformer 1
(PDB) 		8juk (A)
  Conformer 2
(PDB) 		8oy0 (E)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 126 0.71   7 - 90   95 - 110   197 - 224
2 89 0.59   91 - 94   111 - 196

Sequence


           ________________________________________________________________________________________90__94_____________110__________ 
 8juk(A) : MNDVRNDDPNFNVMGNFDHGLTLALSKGRILKETLPLLATAGINLLEDPEKSRKLIFPTTHKQVRILILRASDVPTYVENGAADLGVAGKDVLMEHGAQHVYELLDLQIAKCKLMTAGKV 
         :                                                                                                                          
 8oy0(E) : ****RNDDPNFNVMGNFDHGLTLALSK-rILKETLPLLATAGINLLEDPEKSRK-iFPTTHKQVRILILRASDVPTYVENGAADLGVAGKDVLMEHGAQHVYELLDLQIAKCKLMTAGKV 
           ________________________________________________________________________________________90__94_____________110__________ 

           _________________________________________________________________________196_______________________________              
 8juk(A) : GMERPKGRLKIATKYVNLTRQYYASLGEQVDVIKLYGSMELAPLVGLGDYIVDVVDTGNTLRANGLEPLEEICKVSSRLIVNKASFKRKQVLLNPIISQLEQAVQSR              
         :                                                                                                                          
 8oy0(E) : GMERPKGRLKIATKYVNLTRQYYASLGEQVDVIKLYGSMELAPLVGLGDYIVDVVD-gNTLRANGLEPLEEICKVSSRLIVNKASFKRKQVLLNPIISQLEQAVQS*              
           _________________________________________________________________________196_______________________________              

Morph

Jmol._Canvas2D (Jmol) "jmolApplet"[x]

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		16.4
Translation
(A) 		-0.2
Closure
(%) 		99.2
Bending Residues
( green ) 		  90 - 91
  94 - 95
  110 - 112
  196 - 197
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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