Myosin-7

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Myosin-7
  Conformer 1
(PDB)
8act (A)
  Conformer 2
(PDB)
9gz1 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 26 1.33   841 - 866
2 803 1.84   5 - 840
3 38 0.9   867 - 904

Sequence


           ________________________________________________________________________________________________________________________ 
 8act(A) : DSEMAVFGAAAPYLRKSEKERLEAQTRPFDLKKDVFVPDDKQEFVKAKIVSREGGKVTAETEYGKTVTVKEDQVMQQNPPKFDKIEDMAMLTFLHEPAVLYNLKDRYGSWMIYTYSGLFC 
         :                                                                                                                          
 9gz1(A) : DSEMAVFGAAAPYLRKSEKERLEAQTRPFDLKKDVFVPDDKQEFVKAKIVSREGGKVTAETEYGKTVTVKEDQVMQQNPPKFDKIEDMAMLTFLHEPAVLYNLKDRYGSWMIYTYSGLFC 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 8act(A) : VTVNPY-wLPVYTPEVVAAYRGKKRSEAPPHIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGgTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFG 
         :                                                                                                                          
 9gz1(A) : VTVNPYKWLPVYTPEVVAAYRGKKRSEAPPHIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGgTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFG 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 8act(A) : ATGKLASADIETYLLEKSRVIFQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYAFISQGETTVASIDDAEELMATDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQREEQA 
         :                                                                                                                          
 9gz1(A) : ATGKLASADIETYLLEKSRVIFQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYAFISQGETTVASIDDAEELMATDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQREEQA 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 8act(A) : EPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHM 
         :                                                                                                                          
 9gz1(A) : EPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHM 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 8act(A) : FVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTF-aKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSS 
         :                                                                                                                          
 9gz1(A) : FVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSS 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 8act(A) : LKLLSTLFANY-qTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDID 
         :                                                                                                                          
 9gz1(A) : LKLLSTLFANYfQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDID 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________________________836___________________________866______ 
 8act(A) : HNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRIQAQSRGVLARMEYKKLLERRDSLLVIQWNIRAFMGVKNWPWMKLYFKIKPLLKSAEREKEMASMKEEFTRLKEALEKSEARRKE 
         :                                                                                                                          
 9gz1(A) : HNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRIQAQSRGVLARMEYKKLLERRDSLLVIQWNIRAFMGVKNWPWMKLYFKIKPLLKSAEREKEMASMKEEFTRLKEALEKSEARRKE 
           _________________________________________________________________________________836___________________________866______ 

           ____________________________________________________________                                                             
 8act(A) : LEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCD**************************                                                             
         :                                                                                                                          
 9gz1(A) : LEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNERLEDEEEM                                                             
           ____________________________________________________________                                                             

Morph

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This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
69.0
Translation
(A)
3.7
Closure
(%)
47.1
Bending Residues
( green )
  836 - 843
Bending Region Analysis
Property Value
Fixed Domain
( blue )
1
Moving Domain
( yellow )
3
Rotation Angle
(deg)
53.1
Translation
(A)
-0.9
Closure
(%)
19.3
Bending Residues
( green )
  866 - 871
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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