Sensory Transduction Regulatory Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Sensory Transduction Regulatory Protein
  Conformer 1
(PDB) 		5uxw (B)
  Conformer 2
(PDB) 		4qic (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 115 2.65   4 - 137
2 85 2.16   138 - 222

Sequence


           ________________________________________________________________________________________________________________________ 
 5uxw(B) : SLSTRIAPHLPYLRRFARSVTGSQSSGDAYVSAMLEALIADISIFPRASSDRIGTYWLFCHLFDQa------KLSYLTPRARQAFLLIAVEGFNEQEASEIMNLDARDFRKLLNQASIDI 
         :                                                                                                                          
 4qic(C) : SLSTRIAPHLPYLRRFARSVTGSQSSGDAYVSAMLEALVADISIFPRASCDRIGTYWLFCHLFDQTTPNIPEkLSYLTPRARQAFLLIAVEGFNEQEASEIMNLDARDFRKLLNQASIDI 
           ________________________________________________________________________________________________________________________ 

           137_____________________________________________________________________________________________________________________ 
 5uxw(B) : SQQIATQVMIIEDEPLIAMDIEQMVESLGHQVVGIARTRKEAVVMYHQKKPRLILADIQLADNSSGIDAVNDILQNDRIPVIFITAFPERLLTGERPEPTFLVTKPFNPDMVKALISQAL 
         :                                                                                                                          
 4qic(C) : SQQIATQVMIIEDEPLIAMDIEQMVESLGHQVVGIARTRKEAVVMYHQKKPRLILADIQLADNSSGIDAVNDILQNDRIPVIFITAFPERLLTGe---PTFLVTKPFNPDMVKALISQAL 
           137_____________________________________________________________________________________________________________________ 

           ___________                                                                                                              
 5uxw(B) : FFKENASKAAL                                                                                                              
         :                                                                                                                          
 4qic(C) : FFK********                                                                                                              
           ___________                                                                                                              

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		79.6
Translation
(A) 		-1.1
Closure
(%) 		82.5
Bending Residues
( green ) 		  137 - 138
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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