Acetyl Transferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Acetyl Transferase
  Conformer 1
(PDB)
1s7k (A)
  Conformer 2
(PDB)
1z9u (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 84 0.87   5 - 67   69 - 83   98 - 116   138 - 143
2 68 0.48   68 - 68   84 - 97   117 - 137   144 - 175

Sequence


           ____________________________________________________________67______________83____________97________________116_________ 
 1s7k(A) : EIIPVSTTLELRAADESHVPALHQLVLKN----------------tRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAIEPINKAAYIGYWLDESFQGQGIMSQSLQALMTHYARRG 
         :                                                                                                                          
 1z9u(A) : EIIPVSTTLELRAADESHVPALHQLVLKNKAWLQQSLDqYtSQEETRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAIEPINKAAYIGYWLDESFQGQGIMSQSLQALMTHYARRG 
           ____________________________________________________________67______________83____________97________________116_________ 

           _________137___143____________________________________                                                                   
 1s7k(A) : DIRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAEYLNGDYHDVNMYARIIDAD                                                                   
         :                                                                                                                          
 1z9u(A) : DIRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAEYLNGDYHDVNMYARIID**                                                                   
           _________137___143____________________________________                                                                   

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
7.3
Translation
(A)
-0.4
Closure
(%)
33.8
Bending Residues
( green )
  67 - 69
  83 - 84
  97 - 98
  116 - 117
  137 - 139
  143 - 144
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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