Aristolochene Synthase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Aristolochene Synthase
  Conformer 1
(PDB)
2oa6 (D)
  Conformer 2
(PDB)
2e4o (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 164 1.53   24 - 160   171 - 195   313 - 314
2 126 0.78   16 - 23   161 - 170   196 - 312   315 - 315

Sequence


           _________23_____________________________________________________________________________________________________________ 
 2oa6(D) : SLEPPPSTFQPLCHPLVEEVSKEVDGYFLQHWNFPNEKARKKFVAAGFSRVTCLYFPKALDDRIHFACRLLTVLFLIDDLLEYMSFEEGSAYNEKLIPISRGDVLPDRSIPVEYIIYDLW 
         :                                                                                                                          
 2e4o(B) : SLEPPPSTFQPLCHPLVEEVSKEVDGYFLQHWNFPNEKARKKFVAAGFSRVTCLYFPKALDDRIHFACRLLTVLFLIDDLLEYMSFEEGSAYNEKLIPISRGDVLPDRSIPVEYIIYDLW 
           _________23_____________________________________________________________________________________________________________ 

           _________________________160_______170______________________195_________________________________________________________ 
 2oa6(D) : ESMRAHDREMADEILEPVFLFMRAQTDRTRARPMGLGGYLEYRERDVGKELLAALMRFSMGLKLSPSELQRVREIDANCSKHLSVVNDIYSYEKELYTSKTAHSEGGILCTSVQILAQEA 
         :                                                                                                                          
 2e4o(B) : ESMRAHDREMADEILEPVFLFMRAQTDRTRARPMGLGGYLEYRERDVGKELLAALMRFSMGLKLSPSELQRVREIDANCSKHLSVVNDIYSYEKELY----------iLCTSVQILAQEA 
           _________________________160_______170______________________195_________________________________________________________ 

           ________________________________________________________311_______                                                       
 2oa6(D) : DVTAEAAKRVLFVMCREWELRHQLLVARLSAEGLETPGLAAYVEGLEYQMSGNELWSQTTLRYSVV                                                       
         :                                                                                                                          
 2e4o(B) : DVTAEAAKRVLFVMCREWELRHQLLVARLSAEGLETPGLAAYVEGLEYQMSGNELWSQTTLRYSV*                                                       
           ________________________________________________________311_______                                                       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
11.1
Translation
(A)
0.2
Closure
(%)
98.3
Bending Residues
( green )
  23 - 24
  160 - 164
  170 - 171
  195 - 196
  311 - 315
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download