Aspartate Aminotransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Aspartate Aminotransferase
  Conformer 1
(PDB)
1ix8 (A)
  Conformer 2
(PDB)
1toi (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 293 0.43   40 - 333   353 - 360
2 87 0.81   18 - 39   334 - 352   361 - 406

Sequence


           _________________________________39_____________________________________________________________________________________ 
 1ix8(A) : MFENITAAPADPILGLADLFRADERPGKINLGIGFYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSV 
         :                                                                                                                          
 1toi(A) : MFENITAAPADPILGLADLFRADERPGKINLGIGLYYDETGKIPVLTSVKKAEQYLLENETTKLYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSV 
           _________________________________39_____________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1ix8(A) : KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV 
         :                                                                                                                          
 1toi(A) : KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________________328_____________________352____________________ 
 1ix8(A) : ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLR 
         :                                                                                                                          
 1toi(A) : ASSYS-nFGLYNERVGACTLVAADSETVDRAFSQMKAAIRDNYSSPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLR 
           _________________________________________________________________________328_____________________352____________________ 

           ____________________________________                                                                                     
 1ix8(A) : LREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL                                                                                     
         :                                                                                                                          
 1toi(A) : LREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL                                                                                     
           ____________________________________                                                                                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
11.3
Translation
(A)
-0.5
Closure
(%)
100.0
Bending Residues
( green )
  39 - 47
  328 - 334
  352 - 353
  355 - 364
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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