Beta-Alanine Synthase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Beta-Alanine Synthase
  Conformer 1
(PDB)
1r43 (A)
  Conformer 2
(PDB)
1r3n (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 305 0.42   22 - 245   366 - 451
2 117 0.19   246 - 365

Sequence


           ________________________________________________________________________________________________________________________ 
 1r43(A) : GTLNLPAAAPLSIASGRLNQTILETGSQFGGVARWGQESHEFG-rRLAGTALDGA-rDWFTNECESLGCKVKVDKIGN-fAVYPGKNGGKPTATGSHLDTQPEAGKYDGILGVLAGLEVL 
         :                                                                                                                          
 1r3n(D) : *TLNLPAAAPLSIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVDKIGNMFAVYPGKNGGKPTATGSHLDTQPEAGKYDGILGVLAGLEVL 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________________________________________________245____________ 
 1r43(A) : RTFKDNNYVPNYDVCVVVWFNEEGARFARSCTGSSVWSHDLSLEEAYGL-sVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVH 
         :                                                                                                                          
 1r3n(D) : RTFKDNNYVPNYDVCVVVWFNEEGARFARSCTGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVH 
           _________________________________________________________________________________________________________245____________ 

           _______________________________________________________________________________________________________363______________ 
 1r43(A) : GVGAHAGTTPWRLRKDALL-sSK-iVAASEIAQRHNGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVLAT-lKEAAAEFDRLIKINDGGALSYESETLQVSPAVNFHEVCIECVSR 
         :                                                                                                                          
 1r3n(D) : GVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRHNGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKINDGGALSYESETLQVSPAVNFHEVCIECVSR 
           _______________________________________________________________________________________________________363______________ 

           ______________________________________________________________________________                                           
 1r43(A) : SAFAQFKKDQVRQIWSGAGHDSCQTAPHVPTS-iFIPSKDGLSHNYYEYSSPEEIENGFKVLLQAIINYDNYRVIRGH                                           
         :                                                                                                                          
 1r3n(D) : SAFAQFKKDQVRQIWSGAGHDSCQTAPHVPTSMIFIPSKDGLSHNYYEYSSPEEIENGFKVLLQAIINYDNYRVIRGH                                           
           ______________________________________________________________________________                                           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.2
Translation
(A)
0.3
Closure
(%)
98.1
Bending Residues
( green )
  245 - 246
  363 - 366
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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