Carbon Monoxide Oxidation System Transcription Regulator Cooa-1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Carbon Monoxide Oxidation System Transcription Regulator Cooa-1
  Conformer 1
(PDB)
2hkx (A)
  Conformer 2
(PDB)
2fmy (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 136 3.01   4 - 139
2 78 0.87   140 - 217

Sequence


           ________________________________________________________________________________________________________________________ 
 2hkx(A) : ATQMRLTDTNLLEVLNSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCTHTRAFIQAMEDTTILYTDIRNFQNIVVEFPAFSLNMVKVL 
         :                                                                                                                          
 2fmy(C) : ATQMRLTDTNLLEVLNSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCTHTRAFIQAMEDTTILYTDIRNFQNIVVEFPAFSLNMVKVL 
           ________________________________________________________________________________________________________________________ 

           ____________136___________________________________________________________________________________                       
 2hkx(A) : GDLLKLLLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLELGLNTEEIALMLGTTRQTVSVLLNDFKKMGILERVNQRTLLLKDLQKLKEFSS                       
         :                                                                                                                          
 2fmy(C) : GDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLELGLNTEEIALMLGTTRQTVSVLLNDFKKMGILERVNQRTLLLKDLQKLKEFSS                       
           ___________2136___________________________________________________________________________________                       

Morph

Morph animation in progress.
Status: Initialising

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
179.0
Translation
(A)
-5.9
Closure
(%)
94.0
Bending Residues
( green )
  136 - 140
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

Download and extract PyMOL PML script file Download