Cell Division Protein Ftsh

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cell Division Protein Ftsh
  Conformer 1
(PDB)
2ce7 (C)
  Conformer 2
(PDB)
2ce7 (F)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 74 0.29   325 - 397   448 - 448
2 158 0.19   154 - 324
3 158 0.32   402 - 445   466 - 603

Sequence


           ________________________________________________________________________________________________________________________ 
 2ce7(C) : YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGR-- 
         :                                                                                                                          
 2ce7(F) : YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRdE 
           ________________________________________________________________________________________________________________________ 

           __________________________________________324______________________________________________________________________397__ 
 2ce7(C) : -eQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGRFDKKIVVDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAID 
         :                                                                                                                          
 2ce7(F) : REQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGRFDKKIVVDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAID 
           __________________________________________324______________________________________________________________________397__ 

           ___________________________________445__________________________________________________________________________________ 
 2ce7(C) : RVIlISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWG 
         :                                                                                                                          
 2ce7(F) : RVI-iSPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGy----------LVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWG 
           ___________________________________445__________________________________________________________________________________ 

           ________________________________________________________________                                                         
 2ce7(C) : rNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEFE                                                         
         :                                                                                                                          
 2ce7(F) : rNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEF*                                                         
           ________________________________________________________________                                                         

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
4.5
Translation
(A)
-0.3
Closure
(%)
21.9
Bending Residues
( green )
  324 - 325
Bending Region Analysis
Property Value
Fixed Domain
( blue )
1
Moving Domain
( yellow )
3
Rotation Angle
(deg)
2.7
Translation
(A)
0.7
Closure
(%)
88.8
Bending Residues
( green )
  397 - 402
  445 - 467
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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