Complement Decay-Accelerating Factor

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Complement Decay-Accelerating Factor
  Conformer 1
(PDB)
1h03 (P)
  Conformer 2
(PDB)
1h2q (P)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 60 0.54   68 - 127
2 55 0.56   7 - 67

Sequence


           __________________________________________________________64____________________________________________________________ 
 1h03(P) : KSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPP 
         :                                                                                                                          
 1h2q(P) : KSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCL------qWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPP 
           __________________________________________________________64____________________________________________________________ 

           _____                                                                                                                    
 1h03(P) : PECRG                                                                                                                    
         :                                                                                                                          
 1h2q(P) : PECRG                                                                                                                    
           _____                                                                                                                    

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
21.6
Translation
(A)
-0.1
Closure
(%)
37.2
Bending Residues
( green )
  64 - 68
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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