Ecoo109ir

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ecoo109ir
  Conformer 1
(PDB)
1wtd (A)
  Conformer 2
(PDB)
1wte (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 206 2.04   3 - 126   150 - 156   159 - 166   196 - 270
2 54 2.06   127 - 149   157 - 158   167 - 195

Sequence


           _______________________________________________________________________________________________________________________1 
 1wtd(A) : MNKQEVILKVQECAAWWILERQSKLTKLMSETMSINPFMTPFIFDYHSLNDFDELVEAIIAKHLMTGHDTGFGKLIDEKILPRVFGAYKLDK--------fIHPCFDEIDHVIQRDDGRI 
         :                                                                                                                          
 1wte(A) : MNKQEVILKVQECAAWWILERQSKLTKLMSETMSINPFMTPFIFDYHSLNDFDELVEAIIAKHLMTGHDTGFGKLIDEKILPRVFGAYKLDKSYRAANEPFIHPCFDEIDHVIQRDDGRI 
           _______________________________________________________________________________________________________________________1 

           22________________________149____156_______166__________________________195_____________________________________________ 
 1wtd(A) : ELLSLKAGKWTIQLTMAVQLNKAFHEIINNYPGVADNIVVGVFYGNSHGLTDKYRILRGINTGANHNVIDIRDKVHVYAGKEFWSWLNNGEAETQHWVLEGIERAVKEADIKEKNKDLIE 
         :                                                                                                                          
 1wte(A) : ELLSLKAGKWTIQLTMAVQLNKAFHEIINNYPGVADNIVVGVFYGNSHGLTDKYRILRGINTGANHNVIDIRDKVHVYAGKEFWSWLNNGEAETQHWVLEGIERAVKEADIKEKNKDLIE 
           22________________________149____156_______166__________________________195_____________________________________________ 

           ________________________________                                                                                         
 1wtd(A) : KFKEHVAKKYNEQVLNADGTAQWHKLLEMINE                                                                                         
         :                                                                                                                          
 1wte(A) : KFKEHVAKKYNEQVLNADGTAQWHKLLEMINE                                                                                         
           ________________________________                                                                                         

Morph

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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
29.5
Translation
(A)
0.5
Closure
(%)
91.8
Bending Residues
( green )
  122 - 127
  149 - 150
  156 - 159
  166 - 167
  195 - 196
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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