Glucokinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Glucokinase
  Conformer 1
(PDB)
1q18 (A)
  Conformer 2
(PDB)
1sz2 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 182 0.38   109 - 113   116 - 146   152 - 299
2 129 0.95   4 - 108   114 - 115   147 - 151   300 - 319

Sequence


           _____________________________________________________________________________________________________108________________ 
 1q18(A) : TKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAtNHTWAFSIAEkKNLGFSHLEIINDFTAVSaIPlKKEHLIQFGGAEPV 
         :                                                                                                                          
 1sz2(B) : TKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAtNHTWAFSIAEkKNLGFSHLEIINDFTAVSaIPlKKEHLIQFGGAEPV 
           _____________________________________________________________________________________________________108________________ 

           __________________146___________________________________________________________________________________________________ 
 1q18(A) : EGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDCRRALSLFCVIgRFGG 
         :                                                                                                                          
 1sz2(B) : EGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDCRRALSLFCVIgRFGG 
           __________________146___________________________________________________________________________________________________ 

           __________________________________________________299______________________                                              
 1q18(A) : NLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL                                              
         :                                                                                                                          
 1sz2(B) : NLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL                                              
           __________________________________________________299______________________                                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
12.2
Translation
(A)
-0.1
Closure
(%)
86.2
Bending Residues
( green )
  108 - 118
  146 - 153
  299 - 300
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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