Glucose-Resistance Amylase Regulator

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Glucose-Resistance Amylase Regulator
  Conformer 1
(PDB) 		1zvv (G)
  Conformer 2
(PDB) 		1sxi (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 84 0.91   65 - 115   119 - 140   146 - 155   186 - 189
2 41 0.68   62 - 62   116 - 118   141 - 145   156 - 160   292 - 321
3 134 0.66   161 - 185   190 - 291   322 - 330

Sequence


           _________________________________________________________62__________________________________________________115________ 
 1zvv(G) : MNVTIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIEyRPNAVARGLASKKTTTVGVIIPDISNIFYAELARGIEDIASMYKYNIILSNSDQNQDKQLHLLNNMLGKQVDGIIFM 
         :                                                                                                                          
 1sxi(B) : ********************************************************TTTVGVIIPDISNIFYAELARGIEDIAT-yKYNIILSNSDQNQDKELHLLNN-lGKQVDGIIF- 
           _________________________________________________________62__________________________________________________115________ 

           ______________140__145_______155__160______________________185_189______________________________________________________ 
 1zvv(G) : SGNVTEEHVEELKKSPVPVVLAASIESTNQIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTESGLPVRDSYIVEGDYTYDSGIEAVEKLLEEDEKPTAI 
         :                                                                                                                          
 1sxi(B) : sGNVTEEHVEELKKSPVPVVLAASIESTNQIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTESGLPVRDSYIVEGDYTYDSGIEAVEKLLEEDEKPTAI 
           ______________140__145_______155__160______________________185_189______________________________________________________ 

           _____________________________________________291___________________________321___________                                
 1zvv(G) : FVGTDEMALGVIHGAQDRGLNVPNDLEIIGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVDSSIVELPHRIEFRQSTK                                
         :                                                                                                                          
 1sxi(B) : FVGTDE-aLGVIHGAQDRGLNVPNDLEIIGFDNTRLST-vRPQLTSVVQP-yDIGAVA-rLLTKY-nKETVDSSIVQLPHRIEFRQSTK                                
           _____________________________________________291___________________________321___________                                

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Domain Pairs

Fixed Domain Moving Domain Rotation Angle Translation   (A) Closure Bending Residues  
1 2 13.1 0.2 93.2   62 - 65   115 - 116   118 - 119   140 - 141   145 - 146   155 - 156 Bending Region Analysis
1 3 8.0 -0.1 99.2   185 - 186   189 - 190 Bending Region Analysis
2 3 14.7 0.1 37.2   160 - 161   291 - 295   321 - 322 Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Hinge

Conformer 1 Contact:
Residue 2 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 2

Movement classification:

No Contacts

PyMOL Script

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