Hepatocyte Growth Factor

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Hepatocyte Growth Factor
  Conformer 1
(PDB)
1gp9 (C)
  Conformer 2
(PDB)
1gmo (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 85 0.49   40 - 124
2 82 0.54   125 - 206

Sequence


           _________________________________________________________________________________120____________________________________ 
 1gp9(C) : *YVHEFKKSAKTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMI 
         :                                                                                                                          
 1gmo(C) : NTIHEFKKSAKTTLIKIDPALKIKTKKVNTADQCADRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMI 
           _________________________________________________________________________________120____________________________________ 

           ____________________________________________________                                                                     
 1gp9(C) : PHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSE                                                                     
         :                                                                                                                          
 1gmo(C) : PHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSE                                                                     
           ____________________________________________________                                                                     

Morph

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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
22.0
Translation
(A)
0.3
Closure
(%)
57.2
Bending Residues
( green )
  120 - 132
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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