4-Hydroxythreonine-4-Phosphate Dehydrogenase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 4-Hydroxythreonine-4-Phosphate Dehydrogenase
  Conformer 1
(PDB)
1r8k (A)
  Conformer 2
(PDB)
1ps7 (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 190 0.54   5 - 146   150 - 150   154 - 154   279 - 326
2 126 0.58   147 - 149   153 - 153   155 - 278   327 - 327

Sequence


           ________________________________________________________________________________________________________________________ 
 1r8k(A) : *SAQRVVITPGEPAGSGPDLVVQLAQRAWPIELVVCADGALLTERAAlGLPLSLLPYSPDVPAAPQPAGTLTLLPVSLRAPAISGQLTVENGPYVVETLARACDGCLNGEFAALITGPVH 
         :                                                                                                                          
 1ps7(C) : VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAlGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRAPVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVH 
           ________________________________________________________________________________________________________________________ 

           _____________________146________________________________________________________________________________________________ 
 1r8k(A) : KGVINDAGISFTGHTEFFEERSQAKKVVlATEELRVALATTHLPLRAIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHgTEEIDTIIPVLDELRAQGkLNGPLPA 
         :                                                                                                                          
 1ps7(C) : KGVINDAGIPFTGHTEFFEERSQAKKVVlATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHgTEEIDTIIPVLNELRAQGkLNGPLPA 
           _____________________146________________________________________________________________________________________________ 

           __________________________276______________________________________________326___                                        
 1r8k(A) : DTLFQPKYLDNADAVLAyHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKiVNTQ                                        
         :                                                                                                                          
 1ps7(C) : DTLFQPKYLDNADAVLAyHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKiVNTQ                                        
           __________________________276______________________________________________326___                                        

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
7.5
Translation
(A)
0.0
Closure
(%)
97.2
Bending Residues
( green )
  146 - 147
  149 - 159
  276 - 281
  326 - 327
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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