Hypothetical Protein Rv1264/mt1302

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Hypothetical Protein Rv1264/mt1302
  Conformer 1
(PDB)
1y10 (B)
  Conformer 2
(PDB)
1y10 (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 295 1.16   58 - 152   154 - 156   171 - 374
2 51 1.12   22 - 57   153 - 153   157 - 170

Sequence


           __________________________________________57____________________________________________________________________________ 
 1y10(B) : ******LGGTARAERAKLVEWLLEQGITPDEIRATNPPLLLATRHLVGDDGTYVSAREISENYGVDLELLQRVQRAVGLARVDDPDAVVHMRADGEAAARAQRFVELGLNPDQVVLVVRV 
         :                                                                                                                          
 1y10(D) : DDLLGDLGGTARAERAKLVEWLLEQGITPDEIRATNPPLLLATRHLVGDDGTYVSAREISENYGVDLELLQRVQRAVGLARVDDPDAVVHMRADGEAAARAQRFVELGLNPDQVVLVVRV 
           __________________________________________57____________________________________________________________________________ 

           ________________152_156_________168_____________________________________________________________________________________ 
 1y10(B) : LAEGLSHAAEAMRYTALEAIMRPGATELDIAKGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVSAEELGHLAGRLAGLARDLT 
         :                                                                                                                          
 1y10(D) : LAEGLSHAAEAMRYTALEAIMRPGATELDIAKGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGF----eVVSAEELGHLAGRLAGLARDLT 
           ________________152_156_________168_____________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1y10(B) : APPVWFIKTIGDAVMLVCPDPAPLLDTVLKLVEVVDTDNNFPRLRAGVASGMAVSRAGDWFGSPVNVASRVTGVARPGAVLVADSVREALGDAPEADGFQWSFAGPRRLRGIRGDVRLFR 
         :                                                                                                                          
 1y10(D) : APPVWFIKTIGDAVMLVCPDPAPLLDTVLKLVEVVDTDNNFPRLRAGVASGMAVSRAGDWFGSPVNVASRVTGVARPGAVLVADSVREALGDA---dGFQWSFAGPRRLRGIRGDVRLFR 
           ________________________________________________________________________________________________________________________ 

           ___                                                                                                                      
 1y10(B) : VRR                                                                                                                      
         :                                                                                                                          
 1y10(D) : VRR                                                                                                                      
           ___                                                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
14.3
Translation
(A)
-1.9
Closure
(%)
85.9
Bending Residues
( green )
  57 - 58
  152 - 154
  156 - 157
  168 - 171
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

Download and extract PyMOL PML script file Download