70 Kda Heat-Shock-Like Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 70 Kda Heat-Shock-Like Protein
  Conformer 1
(PDB)
1ud0 (C)
  Conformer 2
(PDB)
1ud0 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 46 1.05   539 - 586
2 30 0.73   587 - 616

Sequence


           ________________________________________________586_________________________________                                     
 1ud0(C) : LVPRGSHlESYAFNkATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGpGG                                     
         :                                                                                                                          
 1ud0(A) : ***RGSHlESYAFNkATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGpGG                                     
           ________________________________________________586_________________________________                                     

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
23.4
Translation
(A)
0.0
Closure
(%)
20.9
Bending Residues
( green )
  586 - 587
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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