L-Sulfolactate Dehydrogenase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name L-Sulfolactate Dehydrogenase
  Conformer 1
(PDB)
1rfm (G)
  Conformer 2
(PDB)
1rfm (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 290 0.41   4 - 178   220 - 342
2 41 0.52   179 - 219

Sequence


           ________________________________________________________________________________________________________________________ 
 1rfm(G) : ILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAeLAIKKAKNVGVGVVATRNANHFGIAGY 
         :                                                                                                                          
 1rfm(D) : ILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAeLAIKKAKNVGVGVVATRNANHFGIAGY 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________177_______________________________________219___________________________ 
 1rfm(G) : YSELAnQDiGITITNTEPAaPFGGKEKILGTNPIAIAFKGNKYKFSLDaTASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIElSAIGGAEVGTK 
         :                                                                                                                          
 1rfm(D) : YSELAnQDiGITITNTEPAaPFGGKEKILGTNPIAIAFKGNKYKFSLDaTASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIElSAIGGAEVGTK 
           ________________________________________________177_______________________________________219___________________________ 

           _______________________________________________________________________________________________                          
 1rfm(G) : VKGTANPEERCTKGDLFIAINPEFFgKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKkRKDGFEIDKNLYNQLKEICNELGLNIEDYIE                          
         :                                                                                                                          
 1rfm(D) : VKGTANPEERCTKGDLFIAINPEFFgKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKkRKDGFEIDKNLYNQLKEICNELGLNIEDYIE                          
           _______________________________________________________________________________________________                          

Morph

Morph animation in progress.
Status: Initialising

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
14.5
Translation
(A)
0.8
Closure
(%)
46.2
Bending Residues
( green )
  177 - 179
  219 - 220
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

Download and extract PyMOL PML script file Download