Maltose/maltodextrin Import Atp-Binding Protein Malk

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Maltose/maltodextrin Import Atp-Binding Protein Malk
  Conformer 1
(PDB) 		2awo (A)
  Conformer 2
(PDB) 		2awo (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 303 0.79   4 - 78   92 - 93   96 - 97   117 - 122   147 - 371
2 54 1.84   79 - 91   94 - 95   98 - 116   123 - 146

Sequence


           ___________________________________________________________________________78___________91______________________116_____ 
 2awo(A) : ASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVL 
         :                                                                                                                          
 2awo(C) : ASVQLQNVT-------vSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMV----aLYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVL 
           ___________________________________________________________________________78___________91______________________116_____ 

           ______________________146_______________________________________________________________________________________________ 
 2awo(A) : QLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNF 
         :                                                                                                                          
 2awo(C) : QLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNF 
           ______________________146_______________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2awo(A) : LPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPSDIADVILEGEVQVVEQLGNETQIHIQIPSIRQNLVYRQNDVVLVEEGATFAIGLPPERCHLFREDGTA 
         :                                                                                                                          
 2awo(C) : LPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPSDIADVILEGEVQVVEQLGNETQIHIQIPSIRQNLVYRQNDVVLVEEGATFAIGLPPERCHLFREDGTA 
           ________________________________________________________________________________________________________________________ 

           ______________                                                                                                           
 2awo(A) : CRRLHKEPGVAS**                                                                                                           
         :                                                                                                                          
 2awo(C) : CRRLHKEPGVASAS                                                                                                           
           ______________                                                                                                           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		15.8
Translation
(A) 		0.7
Closure
(%) 		98.5
Bending Residues
( green ) 		  78 - 79
  91 - 98
  116 - 117
  119 - 123
  146 - 154
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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