Interleukin-10

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Interleukin-10
  Conformer 1
(PDB)
1vlk  
  Conformer 2
(PDB)
1j7v (L)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 98 1.67   15 - 116
2 38 0.44   117 - 154

Sequence


           _______________________________________________________________________________________________________116______________ 
 1vlk    : *****CDNFPQMLRDLRDAFSRVKTFFQTKDEVDNLLLKESLLEDFKGYLGCQALSEMIQFYLEEVMPQAENQDPEAKDHVNSLGENLKTLRLRLRRCHRFLPCENKSKAVEQIKNAFNK 
         :                                                                                                                          
 1j7v(L) : SCTHFPGNLPNMLRDLRDAFSRVKTFFQMKDQLDNLLLKESLLEDFKGYLGCQALSEMIQFYLEEVMPQAENQDPDIKAHVNSLGENLKTLRLRLRRCHRFLPCENKSKAVEQVKNAFNK 
           _______________________________________________________________________________________________________116______________ 

           ______________________________                                                                                           
 1vlk    : LQEKGIYKAMSEFDIFINYIEAYMTIK***                                                                                           
         :                                                                                                                          
 1j7v(L) : LQEKGIYKAMSEFDIFINYIEAYMTMKIRN                                                                                           
           ______________________________                                                                                           

Morph

Morph animation in progress.
Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
13.9
Translation
(A)
0.2
Closure
(%)
26.4
Bending Residues
( green )
  116 - 117
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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