Calbindin D9k (Minor A Form)

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Calbindin D9k (Minor A Form)
  Conformer 1
(PDB)
4icb  
  Conformer 2
(PDB)
1ht9 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 45 2.26   2 - 46
2 27 0.69   47 - 73

Sequence


           _________________________________________42_________________________________                                             
 4icb    : MKSPEELKGIFEKYAAKEGDPNQLSKEELKLLLQTEFPSLLKGPSTLDELFEELDKNGDGEVSFEEFQVLVKKISQ                                             
         :                                                                                                                          
 1ht9(A) : MKSPEELKGIFEKYAAKEGDPNNLSKEELKLLLQTEFPSLLKGMSTLDELFEELDKNGDGEVSFEEFQVLVKKISQ                                             
           _________________________________________42_________________________________                                             

Morph

Morph animation in progress.
Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
180.0
Translation
(A)
0.8
Closure
(%)
62.3
Bending Residues
( green )
  42 - 47
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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