Cytochrome P450-Cam

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cytochrome P450-Cam
  Conformer 1
(PDB)
2cpp (A)
  Conformer 2
(PDB)
1rf9 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 321 0.55   13 - 158   228 - 229   233 - 244   252 - 412
2 79 1.17   159 - 227   230 - 232   245 - 251

Sequence


           ________________________________________________________________________________________________________________________ 
 2cpp(A) : NLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVWTRCNGGHWIATRGQLIREAYEDYRHFSSECPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLEN 
         :                                                                                                                          
 1rf9(A) : *LAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVWTRCNGGHWIATRGQLIREAYEDYRHFSSECPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLEN 
           ________________________________________________________________________________________________________________________ 

           _________________________157___________________________________________________________________227_______237___________2 
 2cpp(A) : RIQELACSLIESLRPQGQCNFTEDYAEPFPIRIFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGG 
         :                                                                                                                          
 1rf9(A) : RIQELACSLIESLRPQGQCNFTEDYAEPFPIRIFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGG 
           _________________________157___________________________________________________________________227_______237___________2 

           51______________________________________________________________________________________________________________________ 
 2cpp(A) : LDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIV 
         :                                                                                                                          
 1rf9(A) : LDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIV 
           51______________________________________________________________________________________________________________________ 

           _____________________________________________                                                                            
 2cpp(A) : TLKEWLTRIPDFSIAPGAQIQHKSGIVSGVQALPLVWDPATTKAV                                                                            
         :                                                                                                                          
 1rf9(A) : TLKEWLTRIPDFSIAPGAQIQHKSGIVSGVQALPLVWDPATTKAV                                                                            
           _____________________________________________                                                                            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
13.9
Translation
(A)
0.0
Closure
(%)
68.5
Bending Residues
( green )
  157 - 159
  227 - 235
  237 - 245
  251 - 256
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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