Nucleolar RNA Helicase 2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Nucleolar RNA Helicase 2
  Conformer 1
(PDB) 		6l5l (A)
  Conformer 2
(PDB) 		6l5n (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 207 3.4   190 - 405
2 151 2.23   406 - 556

Sequence


           ________________________________________________________________________________________________________________________ 
 6l5l(A) : *FSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGE---rKRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQFERMR 
         :                                                                                                                          
 6l5n(A) : SFSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQFER-r 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________________________________398____________________________ 
 6l5l(A) : NGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYK--sEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLI-----KTAITVEHLAIKCHWTQRAAV 
         :                                                                                                                          
 6l5n(A) : NGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQ-lD-gFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKY-kSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAV 
           _________________________________________________________________________________________398____________________________ 

           ________________________________________________________________________________________________________________________ 
 6l5l(A) : IGDVIRVYSGHQGRTIIFCETKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEE 
         :                                                                                                                          
 6l5n(A) : IGDVIRVYSGHQGRTIIFCETKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEE 
           ________________________________________________________________________________________________________________________ 

           _________________                                                                                                        
 6l5l(A) : YQLVQVEQKAGIKFKRI                                                                                                        
         :                                                                                                                          
 6l5n(A) : YQLVQVEQKAGIKFKRI                                                                                                        
           _________________                                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		162.8
Translation
(A) 		-18.0
Closure
(%) 		98.6
Bending Residues
( green ) 		  398 - 406
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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