Nucleolar RNA Helicase 2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Nucleolar RNA Helicase 2
  Conformer 1
(PDB)
6l5o (A)
  Conformer 2
(PDB)
6l5n (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 212 1.72   189 - 404
2 152 2.23   410 - 561

Sequence


           ________________________________________________________________________________________________________________________ 
 6l5o(A) : SFSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQFERMR 
         :                                                                                                                          
 6l5n(A) : SFSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQFER-r 
           ________________________________________________________________________________________________________________________ 

           __________________________________________________________________________________________399___________________________ 
 6l5o(A) : NGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLI-----KTAITVEHLAIKCHWTQRAAV 
         :                                                                                                                          
 6l5n(A) : NGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQ-lD-gFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKY-kSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAV 
           __________________________________________________________________________________________399___________________________ 

           ________________________________________________________________________________________________________________________ 
 6l5o(A) : IGDVIRVYSGHQGRTIIFCETKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEE 
         :                                                                                                                          
 6l5n(A) : IGDVIRVYSGHQGRTIIFCETKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEE 
           ________________________________________________________________________________________________________________________ 

           _________________                                                                                                        
 6l5o(A) : YQLVQVEQKAGIKFKRI                                                                                                        
         :                                                                                                                          
 6l5n(A) : YQLVQVEQKAGIKFKRI                                                                                                        
           _________________                                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
99.8
Translation
(A)
-7.8
Closure
(%)
93.8
Bending Residues
( green )
  399 - 411
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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