Adenylosuccinate Synthetase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Adenylosuccinate Synthetase
  Conformer 1
(PDB) 		1loo (A)
  Conformer 2
(PDB) 		1iwe (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 235 1.23   31 - 35   55 - 60   66 - 250   254 - 257   259 - 263   268 - 294   303 - 305
2 190 0.84   36 - 54   61 - 65   251 - 253   258 - 258   264 - 267   295 - 302   306 - 455

Sequence


           _______35_________________54____60__64__________________________________________________________________________________ 
 1loo(A) : AATGSRVTVVLGAQWGDEGKGKVVDLLATDADIVSRCQGGNNAGHTVVVDGKEYDFHLLPSGIINTKAVSFIGNGVVIHLPGLFEEAEKNEKKGLKDWEKRLIISDRAHLVFDFHQAVDG 
         :                                                                                                                          
 1iwe(A) : *ATGSRVTVVLGAQWGDEGKGKVVDLLATDADIVSRCQGGNNAGHTVVVDGKEYDFHLLPSGIINTKAVSFIGNGVVIHLPGLFEEAEKNEKKGLKDWEKRLIISDRAHLVFDFHQAVDG 
           _______35_________________54____60__64__________________________________________________________________________________ 

           _____________________________________________________________________________________________________250____257___263_26 
 1loo(A) : LQEVQRQAQEGKNIGTTKKGIGPTYSSKAARTGLRICDLLSDFDEFSARFKNLAHQHQSMFPTLEIDVEGQLKRLKGFAERIRPMVRDGVYFMYEALHGPPKKVLVEGANAALLDIDFGT 
         :                                                                                                                          
 1iwe(A) : LQEVQRQAQEGKNIGTTKKGIGPTYSSKAARTGLRICDLLSDFDEFSARFKNLAHQHQSMFPTLEIDVEGQLKRLKGFAERIRPMVRDGVYFMYEALHGPPKKVLVEGANAALLDIDFGT 
           _____________________________________________________________________________________________________250____257___263_26 

           7________________________294_____302____________________________________________________________________________________ 
 1loo(A) : YPFVTSSNCTVGGVCTGLGIPPQNIGDVYGVVKAYTTRVGIGAFPTEQINEIGDLLQNRGHEWGVTTGRKRRCGWLDLMILRYAHMVNGFTALALTKLDILDVLSEIKVGISYKLNGKRI 
         :                                                                                                                          
 1iwe(A) : YPFVTSSNCTVGGVCTGLGIPPQNIGDVYGVVKAYTTRVGIGAFPTEQINEIGDLLQNRGHEWGVTTGRKRRCGWLDLMILRYAHMVNGFTALALTKLDILDVLSEIKVGISYKLNGKRI 
           7________________________294_____302____________________________________________________________________________________ 

           _______________________________________________________________________                                                  
 1loo(A) : PYFPANQEILQKVEVEYETLPGWKADTTGARKWEDLPPQAQSYVRFVENHMGVAVKWVGVGKSRESMIQLF                                                  
         :                                                                                                                          
 1iwe(A) : PYFPANQEILQKVEVEYETLPGWKADTTGARKWEDLPPQAQSYVRFVENHMGVAVKWVGVGKSRESMIQLF                                                  
           _______________________________________________________________________                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		10.4
Translation
(A) 		-0.4
Closure
(%) 		99.9
Bending Residues
( green ) 		  35 - 36
  54 - 55
  60 - 61
  64 - 70
  250 - 251
  253 - 254
  257 - 259
  263 - 264
  267 - 268
  294 - 295
  302 - 303
  305 - 307
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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