Alcohol Dehydrogenase 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Alcohol Dehydrogenase 1
  Conformer 1
(PDB) 		7ntm (A)
  Conformer 2
(PDB) 		7kcb (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 200 1.45   3 - 155   247 - 249   267 - 279   295 - 297   318 - 345
2 139 0.67   156 - 246   250 - 266   280 - 294   298 - 313

Sequence


           ________________________________________________________________________________________________________________________ 
 7ntm(A) : SIPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYT 
         :                                                                                                                          
 7kcb(A) : SIPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYT 
           ________________________________________________________________________________________________________________________ 

           ________________________________155_____________________________________________________________________________________ 
 7ntm(A) : HDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAH 
         :                                                                                                                          
 7kcb(A) : HDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAH 
           ________________________________155_____________________________________________________________________________________ 

           __245__________________266________277______________294________________313__________________________________              
 7ntm(A) : GVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTSK              
         :                                                                                                                          
 7kcb(A) : GVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTSK              
           __245__________________266________277______________294________________313__________________________________              

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		11.8
Translation
(A) 		-0.1
Closure
(%) 		93.6
Bending Residues
( green ) 		  155 - 156
  245 - 255
  266 - 267
  277 - 280
  294 - 295
  297 - 298
  313 - 318
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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