Alcohol Dehydrogenase Class-P

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Alcohol Dehydrogenase Class-P
  Conformer 1
(PDB) 		8con (A)
  Conformer 2
(PDB) 		4rqu (B)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 190 0.64   8 - 95   119 - 173   273 - 273   297 - 302   328 - 335   345 - 376
2 179 0.6   96 - 118   174 - 272   274 - 296   303 - 327   336 - 344

Sequence


           _____________________________________________________________________________________________95____________________118__ 
 8con(A) : MSTTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINT 
         :                                                                                                                          
 4rqu(B) : ****SQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINT 
           _____________________________________________________________________________________________95____________________118__ 

           __________________________________________________173___________________________________________________________________ 
 8con(A) : ERGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGV 
         :                                                                                                                          
 4rqu(B) : ERGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGV 
           __________________________________________________173___________________________________________________________________ 

           _____________________________272_____________________296_300_____________________324________335______344________________ 
 8con(A) : TECVNPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINK 
         :                                                                                                                          
 4rqu(B) : TECVNPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINK 
           _____________________________272_____________________296_300_____________________324________335______344________________ 

           ___________________                                                                                                      
 8con(A) : AFDYMLKGESIRCIITMGA                                                                                                      
         :                                                                                                                          
 4rqu(B) : AFDYMLKGESIRCIITMGA                                                                                                      
           ___________________                                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		4.7
Translation
(A) 		0.2
Closure
(%) 		99.1
Bending Residues
( green ) 		  95 - 96
  118 - 119
  173 - 174
  272 - 274
  296 - 298
  300 - 303
  324 - 328
  335 - 336
  344 - 345
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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