Alcohol Dehydrogenase Class III

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Alcohol Dehydrogenase Class III
  Conformer 1
(PDB) 		4dla (A)
  Conformer 2
(PDB) 		4dlb (B)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 208 0.36   8 - 42   45 - 177   325 - 346   354 - 370   374 - 374
2 160 0.25   43 - 44   178 - 324   347 - 353   371 - 373   375 - 375

Sequence


           ________________________________________42______________________________________________________________________________ 
 4dla(A) : SATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAAT 
         :                                                                                                                          
 4dlb(B) : SATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAAT 
           ________________________________________42______________________________________________________________________________ 

           ______________________________________________________177_______________________________________________________________ 
 4dla(A) : GVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGV 
         :                                                                                                                          
 4dlb(B) : GVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGV 
           ______________________________________________________177_______________________________________________________________ 

           _________________________________________________________________________________324___________________346___352________ 
 4dla(A) : TEFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLADINK 
         :                                                                                                                          
 4dlb(B) : TEFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLADINK 
           _________________________________________________________________________________324___________________346___352________ 

           _364_______________                                                                                                      
 4dla(A) : AFDLMHDGDCLRVVLDMFV                                                                                                      
         :                                                                                                                          
 4dlb(B) : AFDLMHDGDCLRVVLDMFV                                                                                                      
           _364_______________                                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		2.7
Translation
(A) 		0.0
Closure
(%) 		87.2
Bending Residues
( green ) 		  42 - 45
  177 - 178
  324 - 325
  346 - 347
  352 - 354
  364 - 375
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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