Alpha-Ribazole-5'-Phosphate Phosphatase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Alpha-Ribazole-5'-Phosphate Phosphatase
  Conformer 1
(PDB) 		2p9f (B)
  Conformer 2
(PDB) 		2enw (A)
  Window Length 13
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 123 0.31   8 - 33   38 - 134
2 35 0.24   7 - 7   34 - 37   135 - 164

Sequence


           ______7________________________33_______________________________________________________________________________________ 
 2p9f(B) : MELWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSLPAFSSDLLRARRTAELAGFSPRLYPEMREIHFGALEGALWETLDPRYKEALLRFQGFHPPGGESLSAFQERVFRF 
         :                                                                                                                          
 2enw(A) : MELWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSLPAFSSDLLRARRTAELAGFSPRLYPELREIHFGALEGALWETLDPRHKEALLRFQGFHPPGGESLSAFQERVFRF 
           ______7________________________33_______________________________________________________________________________________ 

           ___________134_____________________________________                                                                      
 2p9f(B) : LEGLKAPAVLFTHGGVVRAVLRALGEDGLVPPGSAVAVDWPRRVLVRLAL*                                                                      
         :                                                                                                                          
 2enw(A) : LEGLKAPAVLFTHGGVVRAVLRALGEDGLVPPGSAVAVDWPRRVLVRLALD                                                                      
           ___________134_____________________________________                                                                      

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		2.8
Translation
(A) 		0.0
Closure
(%) 		54.2
Bending Residues
( green ) 		  7 - 8
  33 - 39
  134 - 135
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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