Argininosuccinate Synthetase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Argininosuccinate Synthetase
  Conformer 1
(PDB) 		1j20 (C)
  Conformer 2
(PDB) 		1kh2 (B)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 249 0.45   63 - 96   129 - 135   175 - 390
2 124 0.54   5 - 62   97 - 128   136 - 174

Sequence


           ____________________________________________________________62________________________________96________________________ 
 1j20(C) : MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGN 
         :                                                                                                                          
 1kh2(B) : MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGN 
           ____________________________________________________________62________________________________96________________________ 

           _____128__133_________________________________174_______________________________________________________________________ 
 1j20(C) : DQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVPpYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALLQRLNEI 
         :                                                                                                                          
 1kh2(B) : DQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVPpYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALLQRLNEI 
           _____128__133_________________________________174_______________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1j20(C) : GGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPEREALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYRQDLVSF 
         :                                                                                                                          
 1kh2(B) : GGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPEREALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYRQD---- 
           ________________________________________________________________________________________________________________________ 

           __________________________                                                                                               
 1j20(C) : gYDQKDAEGFIKIQALRLRVRALVER                                                                                               
         :                                                                                                                          
 1kh2(B) : gYDQKDAEGFIKIQALRLRVRALVER                                                                                               
           __________________________                                                                                               

Morph
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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		4.2
Translation
(A) 		-0.3
Closure
(%) 		98.1
Bending Residues
( green ) 		  62 - 63
  96 - 97
  128 - 129
  133 - 136
  174 - 175
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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