Cytochrome P450

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cytochrome P450
  Conformer 1
(PDB) 		8spp (A)
  Conformer 2
(PDB) 		9eby (A)
  Window Length 15
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 306 1.09   18 - 70   72 - 72   81 - 148   158 - 163   210 - 387
2 48 1.57   71 - 71   73 - 80   149 - 157   164 - 209

Sequence


           ___________________________________________________________70________80_________________________________________________ 
 8spp(A) : *DPLFSPLDPAVLADPYPVYRRLRETHPVYWHAGLDSWLMTRHADCTAILRDPGRFSTDFRKIDIPTPPTLLSLQTLDPPDQTPLRHLALDAVRAQDLDALRKELTLFADQLLDELADRE 
         :                                                                                                                          
 9eby(A) : TDPLFSPLDPAVLADPYPVYRRLRETHPVYWHAGLDSWLMTRHADCTAILRDPGRFSTDFRKIDIPTPPTLLSLQTLDPPDQTPLRHLALDAVRAQDLDALRKELTLFADQLLDELADRE 
           ___________________________________________________________70________80_________________________________________________ 

           ________________148______157_________________________________________________209________________________________________ 
 8spp(A) : SFDFIHDYADVFTLRAITRFIGVEPPETDEAFARFN----------------ePGLRARAHFNDLVRSWLGDPGPHGVLPDVVRLLPGSGVEADDVLVNSVRAFFHAGFEVPSRFLGNAL 
         :                                                                                                                          
 9eby(A) : SFDFIHDYADVFTLRAITRFIGVEPPETDEAFARFNDDLDHSMDAQLDPDAEEPGLRARAHFNDLVRSWLGDPGPHGVLPDVVRLLPGSGVEADDVLVNSVRAFFHAGFEVPSRFLGNAL 
           ________________148______157_________________________________________________209________________________________________ 

           ________________________________________________________________________________________________________________________ 
 8spp(A) : AALLATPGAWEQLVRGDVGLDTAVEELIRYVGPVQALARACLQDTELGGMAVKEGQVVTALIGAANRDPDQFPDPETLRLDRKPNNHLGFGRGAHSCLGLNVARIEAHVTLGALLRHPGV 
         :                                                                                                                          
 9eby(A) : AALLATPGAWEQLVRGDVGLDTAVEELIRYVGPVQALARACLQDTELGGMAVKEGQVVTALIGAANRDPDQFPDPETLRLDRKPNNHLGFGRGAHSCLGLNVARIEAHVTLGALLRHPGV 
           ________________________________________________________________________________________________________________________ 

           _________________________                                                                                                
 8spp(A) : RSAGEPVVRPNGTLRGLSRLPLTLG                                                                                                
         :                                                                                                                          
 9eby(A) : RSAGEPVVRPNGTLRGLSRLPLTLG                                                                                                
           _________________________                                                                                                

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		12.4
Translation
(A) 		-0.6
Closure
(%) 		99.8
Bending Residues
( green ) 		  70 - 73
  80 - 83
  148 - 149
  157 - 183
  209 - 213
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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