Diol Dehydrase Gamma Subunit

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Diol Dehydrase Gamma Subunit
  Conformer 1
(PDB) 		7xrk (C)
  Conformer 2
(PDB) 		1dio (G)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 106 0.46   40 - 53   80 - 171
2 26 0.36   54 - 79

Sequence


           _______45________________________________79_____________________________________________________________________________ 
 7xrk(C) : *ARVSDYPLANKHPEWVKTATNKTLDDFTLENVLSNKVTAQDMRITPETLRLQASIAKDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTKEELLAIADDLESRYQAKICAAFV 
         :                                                                                                                          
 1dio(G) : SARVSDYPLANKHPEWVKTATNKTLDDFTLENVLSNKVTAQDMRITPETLRLQASIAKDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTKEELLAIADDLESRYQAKICAAFV 
           _______45________________________________79_____________________________________________________________________________ 

           _________________                                                                                                        
 7xrk(C) : REAATLYVERKKLKGDD                                                                                                        
         :                                                                                                                          
 1dio(G) : REAATLYVERKKLKGDD                                                                                                        
           _________________                                                                                                        

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		8.6
Translation
(A) 		-0.2
Closure
(%) 		43.0
Bending Residues
( green ) 		  45 - 55
  79 - 80
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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