Els4 Tcr Beta Chain

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Els4 Tcr Beta Chain
  Conformer 1
(PDB)
2nw2 (B)
  Conformer 2
(PDB)
2nx5 (E)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 125 0.56   121 - 245
2 113 0.4   4 - 120

Sequence


           ________________________________________________________________________________________________________________119_____ 
 2nw2(B) : DAGITQSPRHKVTETGTPVTLRCHQTENHRYMYWYRQDPGHGLRLIHYSYGVKDTDKGEVSDGYSVSRSKTEDFLLTLESATSSQTSVYFCATGTGDSNQPQHFGDGTRLSILEDLNKVF 
         :                                                                                                                          
 2nx5(E) : DAGITQSPRHKVTETGTPVTLRCHQTENHRYMYWYRQDPGHGLRLIHYSYGVKDTDKGEVSDGYSVSRSKTEDFLLTLESATSSQTSVYFCATGTGDSNQPQHFGDGTRLSILEDLNKVF 
           ________________________________________________________________________________________________________________119_____ 

           ________________________________________________________________________________________________________________________ 
 2nw2(B) : PPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWG 
         :                                                                                                                          
 2nx5(E) : PPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWG 
           ________________________________________________________________________________________________________________________ 

           ___                                                                                                                      
 2nw2(B) : RAD                                                                                                                      
         :                                                                                                                          
 2nx5(E) : RAD                                                                                                                      
           ___                                                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.9
Translation
(A)
0.0
Closure
(%)
51.9
Bending Residues
( green )
  119 - 122
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download