Exopolyphosphatase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Exopolyphosphatase
  Conformer 1
(PDB) 		2qb7 (A)
  Conformer 2
(PDB) 		2qb8 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 210 0.33   7 - 33   36 - 39   48 - 82   93 - 197   204 - 204   209 - 209   212 - 248
2 178 0.19   34 - 35   40 - 47   83 - 92   198 - 203   205 - 208   210 - 211   249 - 394

Sequence


           ___________________________33____39______47_________________________________82_______91_________________________________ 
 2qb7(A) : RKTVPEFLAHLKSLPISKIASNDVLTICVGNESADMDSIASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTELNSY 
         :                                                                                                                          
 2qb8(A) : RKTVPEFLAHLKSLPISKIASNDVLTICVGNESADMDSIASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTELNSY 
           ___________________________33____39______47_________________________________82_______91_________________________________ 

           ______________________________________________________________________197___203_________________________________________ 
 2qb7(A) : LVDNNDTPKNLKNYIDNVVGIIDHHFDLQKHLDAEPRIVKVSGSCSSLVFNYWYEKLQGDREVVMNIAPLLMGAILIDTSNMRRKVEESDKLAIERCQAVLSGAVNEVSAQGLEDSSEFY 
         :                                                                                                                          
 2qb8(A) : LVDNNDTPKNLKNYIDNVVGIIDHHFDLQKHLDAEPRIVKVSGSCSSLVFNYWYEKLQGDREVVMNIAPLLMGAILIDTSNMRRKVEESDKLAIERCQAVLSGAVNEVSAQGLEDSSEFY 
           ______________________________________________________________________197___203_________________________________________ 

           _248____________________________________________________________________________________________________________________ 
 2qb7(A) : KEIKSRKNDIKGFSVSDILKKDYKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGGEADFVNQCRRFQAERGLDVLVLLTSWRKAGDSHRELVILGDSNVVRELIERVSDKLQLQLFGGN 
         :                                                                                                                          
 2qb8(A) : KEIKSRKNDIKGFSVSDILKKDYKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGGEADFVNQCRRFQAERGLDVLVLLTSWRKAGDSHRELVILGDSNVVRELIERVSDKLQLQLFGGN 
           _248____________________________________________________________________________________________________________________ 

           _________________________________                                                                                        
 2qb7(A) : LDGGVAMFKQLNVEATRKQVVPYLEEAYSNLEE                                                                                        
         :                                                                                                                          
 2qb8(A) : LDGGVAMFKQLNVEATRKQVVPYLEEAYSNLEE                                                                                        
           _________________________________                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		2.8
Translation
(A) 		0.0
Closure
(%) 		68.9
Bending Residues
( green ) 		  33 - 36
  39 - 40
  47 - 48
  82 - 84
  91 - 96
  197 - 199
  203 - 212
  248 - 249
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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