10-Formyltetrahydrofolate Dehydrogenase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 10-Formyltetrahydrofolate Dehydrogenase
  Conformer 1
(PDB) 		2bw0 (A)
  Conformer 2
(PDB) 		2cfi (A)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 279 0.33   4 - 79   100 - 302
2 20 0.56   80 - 99

Sequence


           ________________________________________________________________________________79_________________98___________________ 
 2bw0(A) : *QSMKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGAS 
         :                                                                                                                          
 2cfi(A) : FQSMKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGAS 
           ________________________________________________________________________________79_________________98___________________ 

           ________________________________________________________________________________________________________________________ 
 2bw0(A) : AINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGAWTEA 
         :                                                                                                                          
 2cfi(A) : AINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGAWTEA 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________                                                   
 2bw0(A) : CEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFK                                                   
         :                                                                                                                          
 2cfi(A) : CEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFK                                                   
           ______________________________________________________________________                                                   

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		6.7
Translation
(A) 		0.0
Closure
(%) 		93.8
Bending Residues
( green ) 		  79 - 80
  98 - 101
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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