Glutathione S-Transferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Glutathione S-Transferase
  Conformer 1
(PDB) 		7dw2 (A)
  Conformer 2
(PDB) 		7dw3 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 187 0.24   5 - 110   135 - 179   185 - 220
2 29 0.41   111 - 134   180 - 184

Sequence


           _________________________________________________________________________________________________________110____________ 
 7dw2(A) : KSDVKLLGAWPSPFVMRPRIALNIKSVEYEFLEETLGSKSQLLLESNPVHKKIPVLIHGGKPICESLVIVEYIDEVWSPGPAILPSDPYDRALARFWAAYLDEKWFPTMRNIAAAKDEEA 
         :                                                                                                                          
 7dw3(A) : KSDVKLLGAWPSPFVMRPRIALNIKSVEYEFLEETLGSKSQLLLESNPVHKKTPVLIHGGKPICESLVIVEYIDEVWSPGPAILPSDPYDRALARFWAAYLDEKWFPTMRNIAAAKDEEA 
           _________________________________________________________________________________________________________110____________ 

           _________134__________________________________________179__184______________________________________                     
 7dw2(A) : RKALIDQVGEGLVLLEDAFSKCSKGKGFFGGDQIGYLDIAFGSFLGWLRAIEKMNGVKLMDETRTPGLLKWANSFSSHPAVKDVFPETEKLVEFAKVLAK                     
         :                                                                                                                          
 7dw3(A) : RKALIDQVGEGLVLLEDAFSKCSKGKGFFGGDQIGYLDIAFGSFLGWLRAIEKMNGVKLMDETRTPGLLKWANSFSSHPAVKDVFPETEKLVEFAKVLAK                     
           _________134__________________________________________179__184______________________________________                     

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		5.2
Translation
(A) 		-0.2
Closure
(%) 		100.0
Bending Residues
( green ) 		  110 - 111
  134 - 143
  179 - 180
  184 - 185
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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