Mechanosensitive Ion Channel Flycatcher1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Mechanosensitive Ion Channel Flycatcher1
  Conformer 1
(PDB) 		7n5f (A)
  Conformer 2
(PDB) 		7n5g (B)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 315 2.79   189 - 328   527 - 748
2 46 2.07   329 - 526

Sequence


           ________________________________________________________________________________________________________________328_____ 
 7n5f(A) : SRFGEPlMIELSVFLCLLGCLVCSLwFLLLLVIFSGMLITHWIVHVAVlYFTHGLKTSVEVFIWITVVLATWVMLI----qTRKILEFVTWTIVTVLIGAFLWLVKTTLLKILASSFHLN 
         :                                                                                                                          
 7n5g(B) : ******LMIELSVFLCLLGCLVCS-wFLLLLVIFSGMLITHWIVHV--------lKTSVEVFIWITVVLATWVMLInQPHQTRKILEFVTWTIVTVLIGAFLWLVKTTLLKILASSFHLN 
           ________________________________________________________________________________________________________________328_____ 

           __________________________________________526___________________________________________________________________________ 
 7n5f(A) : RFFDRIQESVFHHSVLQTLAGaFAKWVVKVYNDQAALKHALNDNKTAVKQLNKLVTAILIVMMIVIWLIVTGIATTKLIVLLSSQLVVAAFIFGNTCKTIFEAIIFVFVMHPFDVGDRCV 
         :                                                                                                                          
 7n5g(B) : RFFDRIQESVFHHSVLQTLAG----wVVKVYNDQAALKHALNDNKTAVKQLNKLVTAILIVMMIVIWLIVTGIATTKLIVLLSSQLVVAAFIFGNTCKTIFEAIIFVFVMHPFDVGDRCV 
           __________________________________________526___________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 7n5f(A) : IDGNKMLVEEMNILTTVFLKWDKEKVYYPNSILCTKAIGNFFRSPDQGDVLEFSVDFTTPVLKIGDLKDRIKMYLEQNLNFWHPQHNMVVKEIENVNKIKMALFVNHTINFQDFAEKNRR 
         :                                                                                                                          
 7n5g(B) : IDGNKMLVEEMNILTTVFLKWDKEKVYYPNSILCTKAIGNFFRSPDQGDVLEFSVDFTTPVLKIGDLKDRIKMYLEQNLNFWHPQHNMVVKEIENVNKIKMALFVNHTINFQDFAEKNRR 
           ________________________________________________________________________________________________________________________ 

           ______________________________                                                                                           
 7n5f(A) : RSELVLELKKIFEELDIKYNLLPQEISIRN                                                                                           
         :                                                                                                                          
 7n5g(B) : RSELVLELKKIFEELDIKYNLLPQEISIRN                                                                                           
           ______________________________                                                                                           

Morph
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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		44.3
Translation
(A) 		2.4
Closure
(%) 		65.2
Bending Residues
( green ) 		  328 - 330
  526 - 527
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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