Pantothenate Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Pantothenate Kinase
  Conformer 1
(PDB) 		1esm (B)
  Conformer 2
(PDB) 		1esn (A)
  Window Length 15
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 264 2.87   16 - 64   66 - 66   89 - 309
2 23 3.34   65 - 65   67 - 88

Sequence


           _______________________________________________________64______________________88_______________________________________ 
 1esm(B) : **LtPYLQFDRNQWAALRDSVPtLSEDEIARLKGINEDLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTD 
         :                                                                                                                          
 1esn(A) : QTLtPYLQFDRNQWAALRDSVPtLSEDEIARLKGINEDLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTD 
           _______________________________________________________64______________________88_______________________________________ 

           ________________________________________________________________________________________________________________________ 
 1esm(B) : GFLHPNQVLKERGLkKKGFPESYDhRLVKFVSDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNVLQSGdY--dPHHVFVSDFVDFSIYVDAPEDLLQTWYINRFLKFREG 
         :                                                                                                                          
 1esn(A) : GFLHPNQVLKERGLkKKGFPESYDhRLVKFVSDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNVLQSGdYPHDPHHVFVSDFVDFSIYVDAPEDLLQTWYINRFLKFREG 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________                                                        
 1esm(B) : AFTDPDSYFHNYAKLTKEEAIKTAtLWKEINWLNLKQNILPTRERASLILTKSANHAVEEVRLRK                                                        
         :                                                                                                                          
 1esn(A) : AFTDPDSYFHNYAKLTKEEAIKTAtLWKEINWLNLKQNILPTRERASLILTKSANHAVEEVRLRK                                                        
           _________________________________________________________________                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		49.0
Translation
(A) 		-0.3
Closure
(%) 		80.9
Bending Residues
( green ) 		  64 - 67
  88 - 89
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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