Phosphoribosylglycinamide Formyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Phosphoribosylglycinamide Formyltransferase
  Conformer 1
(PDB) 		1mej (C)
  Conformer 2
(PDB) 		1meo (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 102 0.85   3 - 14   20 - 22   27 - 105   140 - 148   178 - 179
2 91 0.56   15 - 19   23 - 26   106 - 139   149 - 177   180 - 198

Sequence


           ____________13____19_____26____________________________________________________________________________105______________ 
 1mej(C) : RILVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSN 
         :                                                                                                                          
 1meo(A) : *ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSN 
           ____________13____19_____26____________________________________________________________________________105______________ 

           ________________138____________________________________177____________________________                                   
 1mej(C) : AHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKICWV*****                                   
         :                                                                                                                          
 1meo(A) : AHEQALETGVTVTGCTVHFVAE---aGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKICWVKEEHH                                   
           ________________138____________________________________177____________________________                                   

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		7.2
Translation
(A) 		0.3
Closure
(%) 		99.7
Bending Residues
( green ) 		  13 - 15
  19 - 24
  26 - 27
  105 - 106
  138 - 149
  177 - 180
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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