(3R)-Hydroxyacyl-Acp Dehydratase Subunit Hada

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name (3R)-Hydroxyacyl-Acp Dehydratase Subunit Hada
  Conformer 1
(PDB) 		8y21 (C)
  Conformer 2
(PDB) 		4rlj (A)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 89 0.54   8 - 22   57 - 139
2 34 0.43   23 - 56

Sequence


           __________________22________________________________56__________________________________________________________________ 
 8y21(C) : LSADIVGMHYRYPDHYEVEREKIREYAVAVQNDDAWYFEEDGAAELGYKGLLAPLTFICVFGYKAQAAFFKHANI------iVQVDQVLKFEKPIVAGDKLYCDVYVDSVR---gTQIIV 
         :                                                                                                                          
 4rlj(A) : LSADIVGMHYRYPDHYEVEREKIREYAVAVQNDDAWYFEEDGAAELGYKGLLAPLTFICVFGYKAQAAFFKHANIATAEAQIVQVDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIV 
           __________________22________________________________56__________________________________________________________________ 

           ________________________                                                                                                 
 8y21(C) : TKNIVTNEEGDLVQETYTTLAG**                                                                                                 
         :                                                                                                                          
 4rlj(A) : TKNIVTNEEGDLVQETYTTLAGRA                                                                                                 
           ________________________                                                                                                 

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		7.8
Translation
(A) 		-0.1
Closure
(%) 		74.5
Bending Residues
( green ) 		  22 - 23
  56 - 57
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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