50S Ribosomal Protein L20

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 50S Ribosomal Protein L20
  Conformer 1
(PDB) 		2ghj (D)
  Conformer 2
(PDB) 		2ghj (E)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 58 1.52   57 - 115
2 21 0.53   29 - 50

Sequence


           ______________________________50___________________________________________________________________                      
 2ghj(D) : LAKGYRGQRSRSYRRAKEAVrALYYQYRDRKLRKREFRRLWIARINAAVRAYGLNYSTFINGLKKAGIELDRKILADaVRDPQAFEQVVNKVKEALQVQ                      
         :                                                                                                                          
 2ghj(E) : *********SRSYRRAKEAVrALYYQYRDRKLRKREFRRLWIARINAAVRAYGLNYSTFINGLKKAGIELDRKILADaVRDPQAFEQVVNKVKEALQVQ                      
           ______________________________50___________________________________________________________________                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		56.7
Translation
(A) 		1.6
Closure
(%) 		100.0
Bending Residues
( green ) 		  50 - 57
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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