Xyloglucan Endotransglycosylase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Xyloglucan Endotransglycosylase
  Conformer 1
(PDB) 		1un1 (B)
  Conformer 2
(PDB) 		1umz (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 169 0.24   34 - 34   45 - 62   73 - 89   101 - 119   130 - 171   197 - 199   202 - 270
2 91 0.22   11 - 33   35 - 44   63 - 72   90 - 100   120 - 129   172 - 196   200 - 201

Sequence


           _______________________33_________44________________62________72_______________89________100________________119_______12 
 1un1(B) : VAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFH 
         :                                                                                                                          
 1umz(B) : VAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFH 
           _______________________33_________44________________62________72_______________89________100________________119_______12 

           9_______________________________________171______________________196____________________________________________________ 
 1un1(B) : YYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYT 
         :                                                                                                                          
 1umz(B) : YYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYT 
           9_______________________________________171______________________196____________________________________________________ 

           ________________________                                                                                                 
 1un1(B) : IYNYCTDRSRYPSMPPECKRDRDI                                                                                                 
         :                                                                                                                          
 1umz(B) : IYNYCTDRSRYPSMPPECKRDRDI                                                                                                 
           ________________________                                                                                                 

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		2.2
Translation
(A) 		0.1
Closure
(%) 		92.1
Bending Residues
( green ) 		  33 - 35
  44 - 45
  62 - 63
  72 - 73
  89 - 90
  100 - 101
  119 - 120
  129 - 130
  171 - 172
  196 - 197
  199 - 202
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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